Sequence Similarity Clusters for the Entities in PDB 1DE5

Entity #1 | Chains: A,B,C,D
L-RHAMNOSE ISOMERASE protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4868
95 % 3 3 5634 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 3 3 5655
70 % 3 3 5562
50 % 3 7 2176
40 % 3 7 2176
30 % 3 7 2084

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures