Sequence Similarity Clusters for the Entities in PDB 1DE4

Entity #1 | Chains: A,D,G
HEMOCHROMATOSIS PROTEIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 13707
95 % 2 2 12955
90 % 2 2 12753
70 % 2 2 12007
50 % 2 2 10739
40 % 2 2 9749
30 % 690 793 14
Entity #2 | Chains: B,E,H
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 489 544 2
95 % 529 587 3
90 % 538 596 4
70 % 725 823 5
50 % 738 843 5
40 % 738 843 9
30 % 738 843 12
Entity #3 | Chains: C,F,I
TRANSFERRIN RECEPTOR protein, length: 640 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 5352
95 % 2 8 2469
90 % 2 8 2513
70 % 2 8 2498
50 % 2 8 2457
40 % 2 8 2444
30 % 2 8 2289

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.