Sequence Similarity Clusters for the Entities in PDB 1DE4

Entity #1 | Chains: A,D,G
HEMOCHROMATOSIS PROTEIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 14181
95 % 2 2 13386
90 % 2 2 13180
70 % 2 2 12397
50 % 2 2 11074
40 % 2 2 10038
30 % 727 832 15
Entity #2 | Chains: B,E,H
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 521 577 2
95 % 561 620 3
90 % 570 629 4
70 % 758 857 5
50 % 771 877 5
40 % 771 877 9
30 % 771 877 14
Entity #3 | Chains: C,F,I
TRANSFERRIN RECEPTOR protein, length: 640 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 5580
95 % 2 8 2586
90 % 2 8 2634
70 % 2 8 2617
50 % 2 8 2579
40 % 2 8 2554
30 % 2 8 2389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.