Sequence Similarity Clusters for the Entities in PDB 1DDX

Entity #1 | Chains: A,B,C,D
PROTEIN (PROSTAGLANDIN H2 SYNTHASE-2) protein, length: 552 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 17 575
95 % 43 44 288 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 43 44 297
70 % 50 51 299
50 % 78 82 230
40 % 78 82 250
30 % 78 82 259

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.