Sequence Similarity Clusters for the Entities in PDB 1DDW

Entity #1 | Chains: A
GLGF-DOMAIN PROTEIN HOMER protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46195
95 % 1 2 34586 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 2 33037
70 % 1 4 10119
50 % 1 4 9163
40 % 1 4 8385
30 % 10 18 1692

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures