Sequence Similarity Clusters for the Entities in PDB 1DDW

Entity #1 | Chains: A
GLGF-DOMAIN PROTEIN HOMER protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44953
95 % 1 2 33661 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 2 32196
70 % 1 4 9824
50 % 1 4 8902
40 % 1 4 8156
30 % 10 18 1651

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.