Sequence Similarity Clusters for the Entities in PDB 1DDV

Entity #1 | Chains: A
GLGF-DOMAIN PROTEIN HOMER protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46130
95 % 2 2 34534 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 32997
70 % 3 4 10107
50 % 3 4 9150
40 % 3 4 8374
30 % 13 18 1687
Entity #2 | Chains: B
METABOTROPIC GLUTAMATE RECEPTOR MGLUR5 protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.