Sequence Similarity Clusters for the Entities in PDB 1DDU

Entity #1 | Chains: A,B
THYMIDYLATE SYNTHASE protein, length: 265 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 2731
95 % 32 66 340 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 32 66 358
70 % 32 66 396
50 % 65 214 95
40 % 65 216 116
30 % 67 222 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures