Sequence Similarity Clusters for the Entities in PDB 1DDE

Entity #1 | Chains: A
DNA PRIMASE protein, length: 338 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12017
95 % 2 4 8640 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 4 8562
70 % 2 4 8264
50 % 2 4 7559
40 % 2 4 6966
30 % 2 8 3669

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures