Sequence Similarity Clusters for the Entities in PDB 1DDE

Entity #1 | Chains: A
DNA PRIMASE protein, length: 338 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10215
95 % 2 4 7630 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 4 7577
70 % 2 4 7381
50 % 2 4 6802
40 % 2 4 6323
30 % 2 12 3250

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.