Sequence Similarity Clusters for the Entities in PDB 1DD9

Entity #1 | Chains: A
DNA PRIMASE protein, length: 338 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10363
95 % 1 4 7739 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 1 4 7684
70 % 1 4 7476
50 % 1 4 6892
40 % 1 4 6407
30 % 1 12 3291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures