Sequence Similarity Clusters for the Entities in PDB 1DD4

Entity #1 | Chains: A,B
50S RIBOSOMAL PROTEIN L7/L12 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9153
95 % 2 4 9279
90 % 2 4 9172
70 % 2 4 8756
50 % 2 19 1649
40 % 2 19 1662
30 % 2 20 1534
Entity #2 | Chains: C,D
50S RIBOSOMAL PROTEIN L7/L12 protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47014
95 % 1 1 35144
90 % 1 1 33621
70 % 1 1 30010
50 % 1 1 25732
40 % 1 1 22748
30 % 1 1 19326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.