Sequence Similarity Clusters for the Entities in PDB 1DD4

Entity #1 | Chains: A,B
50S RIBOSOMAL PROTEIN L7/L12 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 8861
95 % 2 4 8979
90 % 2 4 8886
70 % 2 4 8487
50 % 2 19 1601
40 % 2 19 1617
30 % 2 20 1490
Entity #2 | Chains: C,D
50S RIBOSOMAL PROTEIN L7/L12 protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45586
95 % 1 1 34057
90 % 1 1 32599
70 % 1 1 29166
50 % 1 1 25044
40 % 1 1 22139
30 % 1 1 18797

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.