Sequence Similarity Clusters for the Entities in PDB 1DCM

Entity #1 | Chains: A,B
TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 7194
95 % 4 4 7734 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 4 4 7687
70 % 4 4 7431
50 % 4 4 6848
40 % 4 4 6368
30 % 211 245 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.