Sequence Similarity Clusters for the Entities in PDB 1DCK

Entity #1 | Chains: A,B
TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 7442
95 % 2 4 8012 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 2 4 7955
70 % 2 4 7711
50 % 2 4 7096
40 % 2 4 6597
30 % 116 256 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures