Sequence Similarity Clusters for the Entities in PDB 1DCK

Entity #1 | Chains: A,B
TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 7251
95 % 2 4 7802 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 2 4 7753
70 % 2 4 7493
50 % 2 4 6897
40 % 2 4 6416
30 % 110 245 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.