Sequence Similarity Clusters for the Entities in PDB 1DCE

Entity #1 | Chains: A,C
PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23822
95 % 1 2 20270
90 % 1 2 19719
70 % 1 2 18191
50 % 1 2 15878
40 % 1 2 14199
30 % 1 2 12193
Entity #2 | Chains: B,D
PROTEIN (RAB GERANYLGERANYLTRANSFERASE BETA SUBUNIT) protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 21 2017
95 % 15 21 2639
90 % 15 21 2688
70 % 15 21 2671
50 % 15 21 2634
40 % 15 21 2605
30 % 15 21 2432

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.