Sequence Similarity Clusters for the Entities in PDB 1DCD

Entity #1 | Chains: A,B
PROTEIN (DESULFOREDOXIN) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 5280
95 % 3 6 5906 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 3 6 5899
70 % 3 6 5770
50 % 3 6 5409
40 % 3 6 5088
30 % 3 6 4572

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.