Sequence Similarity Clusters for the Entities in PDB 1DBW

Entity #1 | Chains: A,B
TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 7237
95 % 1 4 7787 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 1 4 7740
70 % 1 4 7478
50 % 1 4 6883
40 % 1 4 6403
30 % 19 245 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.