Sequence Similarity Clusters for the Entities in PDB 1DBT

Entity #1 | Chains: A,B,C
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29350
95 % 1 1 25648 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 24759
70 % 1 1 22437
50 % 2 3 7443
40 % 7 10 1533
30 % 194 203 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures