Sequence Similarity Clusters for the Entities in PDB 1DBT

Entity #1 | Chains: A,B,C
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28274
95 % 1 1 23574 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 22849
70 % 1 1 20939
50 % 2 3 7143
40 % 7 10 1510
30 % 7 10 1490

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures