Sequence Similarity Clusters for the Entities in PDB 1DBP

Entity #1 | Chains: A
D-RIBOSE-BINDING PROTEIN protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58369
95 % 4 7 6462 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 3.0
PDBFlex
90 % 4 7 6448
70 % 5 8 5675
50 % 6 9 4547
40 % 7 11 3556
30 % 48 62 574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures