Sequence Similarity Clusters for the Entities in PDB 1DBP

Entity #1 | Chains: A
D-RIBOSE-BINDING PROTEIN protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57497
95 % 4 7 6370 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 3.0
PDBFlex
90 % 4 7 6356
70 % 5 8 5588
50 % 6 9 4476
40 % 7 11 3499
30 % 48 62 563

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.