Sequence Similarity Clusters for the Entities in PDB 1DBP

Entity #1 | Chains: A
D-RIBOSE-BINDING PROTEIN protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56120
95 % 4 7 6209 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 2.8
PDBFlex
90 % 4 7 6192
70 % 5 8 5444
50 % 6 9 4362
40 % 7 11 3427
30 % 48 62 555

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.