Sequence Similarity Clusters for the Entities in PDB 1DBO

Entity #1 | Chains: A
CHONDROITINASE B protein, length: 506 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45341
95 % 3 4 21458 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 4 20821
70 % 3 4 19080
50 % 3 4 16502
40 % 3 4 14610
30 % 3 4 12247

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures