Sequence Similarity Clusters for the Entities in PDB 1DBO

Entity #1 | Chains: A
CHONDROITINASE B protein, length: 506 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 31099
95 % 3 4 15315 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 4 15027
70 % 3 4 14078
50 % 3 4 12477
40 % 3 4 11298
30 % 3 4 9816

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.