Sequence Similarity Clusters for the Entities in PDB 1DBO

Entity #1 | Chains: A
CHONDROITINASE B protein, length: 506 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32065
95 % 3 4 15776 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 4 15486
70 % 3 4 14525
50 % 3 4 12849
40 % 3 4 11628
30 % 3 4 10108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures