Sequence Similarity Clusters for the Entities in PDB 1DBN

Entity #1 | Chains: A,B
PROTEIN (LEUKOAGGLUTININ) protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39659
95 % 1 1 30517 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 29443
70 % 1 1 26502
50 % 80 88 180
40 % 147 161 101
30 % 147 161 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures