Sequence Similarity Clusters for the Entities in PDB 1DBM

Entity #1 | Chains: L
IGG1-KAPPA DB3 FAB (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 12069
95 % 124 142 149
90 % 130 149 149
70 % 1168 1765 2
50 % 2858 4337 1
40 % 2858 4337 1
30 % 3318 5109 1
Entity #2 | Chains: H
IGG1-KAPPA DB3 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 12031
95 % 4 6 11589
90 % 4 6 11419
70 % 1381 2096 1
50 % 2859 4337 1
40 % 2859 4337 1
30 % 3319 5109 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.