Sequence Similarity Clusters for the Entities in PDB 1DBM

Entity #1 | Chains: L
IGG1-KAPPA DB3 FAB (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 11762
95 % 121 138 145
90 % 125 143 150
70 % 1131 1704 2
50 % 2737 4154 1
40 % 2737 4155 1
30 % 3171 4901 1
Entity #2 | Chains: H
IGG1-KAPPA DB3 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 11727
95 % 4 6 11322
90 % 4 6 11156
70 % 1324 2010 1
50 % 2738 4154 1
40 % 2738 4155 1
30 % 3172 4901 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.