Sequence Similarity Clusters for the Entities in PDB 1DBJ

Entity #1 | Chains: L
IGG1-KAPPA DB3 FAB (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 11783
95 % 117 138 145
90 % 121 143 150
70 % 1113 1710 2
50 % 2691 4166 1
40 % 2691 4167 1
30 % 3105 4915 1
Entity #2 | Chains: H
IGG1-KAPPA DB3 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 11748
95 % 2 6 11337
90 % 2 6 11172
70 % 1302 2016 1
50 % 2692 4166 1
40 % 2692 4167 1
30 % 3106 4915 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.