Sequence Similarity Clusters for the Entities in PDB 1DBJ

Entity #1 | Chains: L
IGG1-KAPPA DB3 FAB (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 12705
95 % 123 145 147
90 % 132 155 149
70 % 1440 2280 1
50 % 2926 4619 1
40 % 2926 4619 1
30 % 3396 5440 1
Entity #2 | Chains: H
IGG1-KAPPA DB3 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 12667
95 % 2 6 12211
90 % 2 6 12031
70 % 1416 2238 2
50 % 2927 4619 1
40 % 2927 4619 1
30 % 3397 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.