Sequence Similarity Clusters for the Entities in PDB 1DBG

Entity #1 | Chains: A
CHONDROITINASE B protein, length: 506 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 32605
95 % 4 4 16037 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 15743
70 % 4 4 14754
50 % 4 4 13045
40 % 4 4 11800
30 % 4 4 10257

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures