Sequence Similarity Clusters for the Entities in PDB 1DBG

Entity #1 | Chains: A
CHONDROITINASE B protein, length: 506 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 32994
95 % 4 4 16253 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 15951
70 % 4 4 14940
50 % 4 4 13207
40 % 4 4 11940
30 % 4 4 10381

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures