Sequence Similarity Clusters for the Entities in PDB 1DB5

Entity #1 | Chains: A
PROTEIN (PHOSPHOLIPASE A2) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 14 1809
95 % 15 17 1712 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 15 17 1748
70 % 15 17 1754
50 % 171 183 153
40 % 284 309 103
30 % 284 309 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures