Sequence Similarity Clusters for the Entities in PDB 1DB4

Entity #1 | Chains: A
PHOSPHOLIPASE A2 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 1610
95 % 11 17 1639 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 11 17 1675
70 % 11 17 1689
50 % 120 170 149
40 % 203 296 102
30 % 203 296 114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures