Sequence Similarity Clusters for the Entities in PDB 1DB4

Entity #1 | Chains: A
PHOSPHOLIPASE A2 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 1646
95 % 11 17 1676 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 11 17 1717
70 % 11 17 1730
50 % 128 181 146
40 % 211 307 100
30 % 211 307 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures