Sequence Similarity Clusters for the Entities in PDB 1DB2

Entity #1 | Chains: A,B
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25669
95 % 18 21 1187 Flexibility: Medium
Max RMSD: 10.1, Avg RMSD: 3.1
PDBFlex
90 % 18 21 1214
70 % 19 22 1213
50 % 19 22 1270
40 % 23 26 1114
30 % 160 178 183

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.