Sequence Similarity Clusters for the Entities in PDB 1DB1

Entity #1 | Chains: A
VITAMIN D NUCLEAR RECEPTOR protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 39 1012
95 % 13 42 1243 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 18 91 495
70 % 18 91 530
50 % 18 91 567
40 % 18 91 604
30 % 88 992 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures