Sequence Similarity Clusters for the Entities in PDB 1DAY

Entity #1 | Chains: A
PROTEIN KINASE CK2 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 32 1089
95 % 36 41 1151 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 36 41 1172
70 % 109 143 179
50 % 114 149 214
40 % 114 149 232
30 % 2229 3966 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures