Sequence Similarity Clusters for the Entities in PDB 1DAY

Entity #1 | Chains: A
PROTEIN KINASE CK2 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 32 1065
95 % 35 40 1150 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 35 40 1177
70 % 107 141 180
50 % 112 147 212
40 % 112 147 231
30 % 2196 3912 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures