Sequence Similarity Clusters for the Entities in PDB 1DAY

Entity #1 | Chains: A
PROTEIN KINASE CK2 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 32 1040
95 % 35 40 1132 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 35 40 1159
70 % 104 138 180
50 % 109 144 213
40 % 109 144 234
30 % 2131 3825 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.