Sequence Similarity Clusters for the Entities in PDB 1DAO

Entity #1 | Chains: A,B,C,D,E,F,G,H
D-AMINO ACID OXIDASE protein, length: 347 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 1445
95 % 15 16 940 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 15 16 971
70 % 31 32 431
50 % 31 32 498
40 % 31 32 538
30 % 31 32 534

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures