Sequence Similarity Clusters for the Entities in PDB 1DAO

Entity #1 | Chains: A,B,C,D,E,F,G,H
D-AMINO ACID OXIDASE protein, length: 347 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 1385
95 % 13 14 1321 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 13 14 1348
70 % 29 30 500
50 % 29 30 564
40 % 29 30 605
30 % 29 30 594

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.