Sequence Similarity Clusters for the Entities in PDB 1D9Y

Entity #1 | Chains: A
PROTEIN (PERIPLASMIC IRON-BINDING PROTEIN) protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55829
95 % 5 5 1440 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.7
PDBFlex
90 % 5 5 1467
70 % 17 17 1110
50 % 17 17 1149
40 % 17 17 1165
30 % 24 25 835

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.