Sequence Similarity Clusters for the Entities in PDB 1D9K

Entity #1 | Chains: A,E
T-CELL RECEPTOR D10 (ALPHA CHAIN) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43569
95 % 1 1 32637
90 % 1 1 31254
70 % 1 5 7139
50 % 1 5 6596
40 % 399 840 5
30 % 446 966 7
Entity #2 | Chains: B,F
T-CELL RECEPTOR D10 (BETA CHAIN) protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43467
95 % 1 1 32563
90 % 11 24 939
70 % 11 24 971
50 % 11 25 973
40 % 11 25 992
30 % 447 966 7
Entity #3 | Chains: C,G
MHC I-AK A CHAIN (ALPHA CHAIN) protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 20141
95 % 4 16 2165
90 % 4 23 1358
70 % 8 42 725
50 % 32 142 177
40 % 32 142 191
30 % 63 296 99
Entity #4 | Chains: D,H
MHC I-AK B CHAIN (BETA CHAIN) protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39516
95 % 2 7 7261
90 % 3 14 3373
70 % 31 133 164
50 % 32 142 176
40 % 32 142 190
30 % 64 296 99
Entity #5 | Chains: P,Q
CONALBUMIN PEPTIDE protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.