Sequence Similarity Clusters for the Entities in PDB 1D9I

Entity #1 | Chains: A
THROMBIN protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 21 2160
95 % 245 374 35 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 247 381 39
70 % 248 405 45
50 % 248 405 81
40 % 1188 1695 4
30 % 1277 1845 6
Entity #2 | Chains: I
HIRUGEN protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.