Sequence Similarity Clusters for the Entities in PDB 1D9E

Entity #1 | Chains: A,B,C,D
3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 4933
95 % 1 10 5084 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 1 10 5107
70 % 24 34 417
50 % 24 35 470
40 % 64 75 215
30 % 69 80 216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.