Sequence Similarity Clusters for the Entities in PDB 1D9D

Entity #1 | Chains: B
5'-D(*TP*CP*GP)-R(AP*(U31)P*(C31))-3' hybrid, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
DNA POLYMERASE I protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 10 5428
95 % 6 14 4191
90 % 6 14 4219
70 % 6 14 4141
50 % 6 14 4005
40 % 6 14 3831
30 % 6 14 3544

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.