Sequence Similarity Clusters for the Entities in PDB 1D8U

Entity #1 | Chains: A,B
NON-SYMBIOTIC HEMOGLOBIN protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42256
95 % 3 3 12469 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.5
PDBFlex
90 % 3 3 12267
70 % 8 8 2541
50 % 8 8 2508
40 % 15 27 1258
30 % 15 27 1234

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.