Sequence Similarity Clusters for the Entities in PDB 1D8T

Entity #1 | Chains: A,B
ELONGATION FACTOR TU protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 35 805
95 % 10 36 1068 Flexibility: Medium
Max RMSD: 12.3, Avg RMSD: 4.0
PDBFlex
90 % 10 36 1091
70 % 20 65 443
50 % 22 67 503
40 % 22 67 543
30 % 32 93 398
Entity #2 | Chains: C,D
THIOCILLIN GE2270 protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.