Sequence Similarity Clusters for the Entities in PDB 1D8S

Entity #1 | Chains: A,B,C
F1 ATPASE (ALPHA SUBUNIT) protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D,E,F
F1 ATPASE (BETA SUBUNIT) protein, length: 467 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: G
F1 ATPASE (GAMMA SUBUNIT) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.