Sequence Similarity Clusters for the Entities in PDB 1D8M

Entity #1 | Chains: A,B
STROMELYSIN-1 PRECURSOR protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 38 593
95 % 29 39 775 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.8
PDBFlex
90 % 29 39 808
70 % 32 42 750
50 % 197 232 102
40 % 201 236 123
30 % 201 236 130

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures