Sequence Similarity Clusters for the Entities in PDB 1D8L

Entity #1 | Chains: A,B
PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA) protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44598
95 % 1 1 33631 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 32139
70 % 1 1 28661
50 % 1 1 24456
40 % 1 1 21510
30 % 1 1 18216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures