Sequence Similarity Clusters for the Entities in PDB 1D8L

Entity #1 | Chains: A,B
PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA) protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44399
95 % 1 1 37070 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 35388
70 % 1 1 31457
50 % 1 1 26771
40 % 1 1 23485
30 % 1 1 19571

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures