Sequence Similarity Clusters for the Entities in PDB 1D8I

Entity #1 | Chains: A,B,C
MRNA TRIPHOSPHATASE CET1 protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12369
95 % 1 3 8973 Flexibility: Medium
Max RMSD: 11.3, Avg RMSD: 5.0
PDBFlex
90 % 1 3 8899
70 % 1 3 8558
50 % 1 3 7791
40 % 1 3 7180
30 % 1 3 6352

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures