Sequence Similarity Clusters for the Entities in PDB 1D8H

Entity #1 | Chains: A,B,C
mRNA TRIPHOSPHATASE CET1 protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 12663
95 % 2 3 9174 Flexibility: Medium
Max RMSD: 11.3, Avg RMSD: 5.0
PDBFlex
90 % 2 3 9096
70 % 2 3 8734
50 % 2 3 7948
40 % 2 3 7324
30 % 2 3 6480

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures