Sequence Similarity Clusters for the Entities in PDB 1D8H

Entity #1 | Chains: A,B,C
mRNA TRIPHOSPHATASE CET1 protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14976
95 % 2 3 9652 Flexibility: Medium
Max RMSD: 11.3, Avg RMSD: 5.0
PDBFlex
90 % 2 3 9524
70 % 2 3 9091
50 % 2 3 8284
40 % 2 3 7570
30 % 2 3 6572

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures