Sequence Similarity Clusters for the Entities in PDB 1D8F

Entity #1 | Chains: A,B
STROMELYSIN-1 PRECURSOR protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 38 562
95 % 30 39 732 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 30 39 764
70 % 33 42 712
50 % 196 229 95
40 % 200 233 118
30 % 200 233 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.