Sequence Similarity Clusters for the Entities in PDB 1D8E

Entity #1 | Chains: A
FARNESYLTRANSFERASE (ALPHA SUBUNIT) protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 34 320
95 % 41 42 387
90 % 54 56 358
70 % 54 56 395
50 % 54 56 464
40 % 54 56 499
30 % 54 56 499
Entity #2 | Chains: B
FARNESYLTRANSFERASE (BETA SUBUNIT) protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 41 888
95 % 49 56 851
90 % 49 56 883
70 % 49 56 913
50 % 49 56 964
40 % 49 56 980
30 % 49 56 963
Entity #3 | Chains: P
K-RAS4B PEPTIDE SUBSTRATE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.