Sequence Similarity Clusters for the Entities in PDB 1D8E

Entity #1 | Chains: A
FARNESYLTRANSFERASE (ALPHA SUBUNIT) protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 34 286
95 % 41 42 371
90 % 54 56 344
70 % 54 56 384
50 % 54 56 443
40 % 54 56 483
30 % 54 56 483
Entity #2 | Chains: B
FARNESYLTRANSFERASE (BETA SUBUNIT) protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 41 857
95 % 49 56 805
90 % 49 56 840
70 % 49 56 880
50 % 49 56 927
40 % 49 56 950
30 % 49 56 937
Entity #3 | Chains: P
K-RAS4B PEPTIDE SUBSTRATE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.