Sequence Similarity Clusters for the Entities in PDB 1D8D

Entity #1 | Chains: A
farnesyltransferase (alpha subunit) protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 322
95 % 2 42 389
90 % 10 56 358
70 % 10 56 395
50 % 10 56 466
40 % 10 56 504
30 % 10 56 504
Entity #2 | Chains: B
farnesyltransferase (beta subunit) protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 41 890
95 % 10 56 854
90 % 10 56 888
70 % 10 56 918
50 % 10 56 970
40 % 10 56 989
30 % 10 56 968
Entity #3 | Chains: P
K-RAS4B PEPTIDE SUBSTRATE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.