Sequence Similarity Clusters for the Entities in PDB 1D8D

Entity #1 | Chains: A
farnesyltransferase (alpha subunit) protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 320
95 % 2 42 386
90 % 10 56 357
70 % 10 56 394
50 % 10 56 463
40 % 10 56 497
30 % 10 56 496
Entity #2 | Chains: B
farnesyltransferase (beta subunit) protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 41 886
95 % 10 56 850
90 % 10 56 881
70 % 10 56 911
50 % 10 56 960
40 % 10 56 977
30 % 10 56 959
Entity #3 | Chains: P
K-RAS4B PEPTIDE SUBSTRATE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.