Sequence Similarity Clusters for the Entities in PDB 1D7Q

Entity #1 | Chains: B
PROTEIN (N-TERMINAL HISTIDINE TAG) protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
TRANSLATION INITIATION FACTOR 1A protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27444
95 % 3 3 24072
90 % 3 3 23288
70 % 3 3 21189
50 % 8 8 8205
40 % 8 8 7496
30 % 8 8 6515

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures