Sequence Similarity Clusters for the Entities in PDB 1D7Q

Entity #1 | Chains: B
PROTEIN (N-TERMINAL HISTIDINE TAG) protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
TRANSLATION INITIATION FACTOR 1A protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 29849
95 % 3 3 24743
90 % 3 3 23904
70 % 3 3 21745
50 % 8 8 8470
40 % 8 8 7767
30 % 8 8 6846

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures