Sequence Similarity Clusters for the Entities in PDB 1D7F

Entity #1 | Chains: A,B
CYCLODEXTRIN GLUCANOTRANSFERASE protein, length: 686 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17229
95 % 2 11 2838 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 2 11 2886
70 % 5 48 919
50 % 7 52 909
40 % 9 54 910
30 % 9 54 897

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures