Sequence Similarity Clusters for the Entities in PDB 1D7F

Entity #1 | Chains: A,B
CYCLODEXTRIN GLUCANOTRANSFERASE protein, length: 686 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16567
95 % 2 11 2729 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 2 11 2774
70 % 5 48 889
50 % 7 52 884
40 % 9 54 887
30 % 9 54 873

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.