Sequence Similarity Clusters for the Entities in PDB 1D6Z

Entity #1 | Chains: A,B
COPPER AMINE OXIDASE protein, length: 727 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 13 2063
95 % 5 16 1884 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 5 16 1924
70 % 5 16 1946
50 % 5 16 1974
40 % 5 16 1955
30 % 5 16 1863

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures