Sequence Similarity Clusters for the Entities in PDB 1D6W

Entity #1 | Chains: A
THROMBIN protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 21 2051
95 % 169 372 36 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 170 379 38
70 % 170 403 45
50 % 170 403 77
40 % 964 1669 4
30 % 1032 1811 6
Entity #2 | Chains: I
DECAPEPTIDE INHIBITOR protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.