Sequence Similarity Clusters for the Entities in PDB 1D6W

Entity #1 | Chains: A
THROMBIN protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 22 2380
95 % 175 378 52 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 176 385 56
70 % 176 409 47
50 % 176 409 85
40 % 1072 1884 4
30 % 1078 1898 7
Entity #2 | Chains: I
DECAPEPTIDE INHIBITOR protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures