Sequence Similarity Clusters for the Entities in PDB 1D6U

Entity #1 | Chains: A,B
COPPER AMINE OXIDASE protein, length: 727 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 1912
95 % 11 16 1774 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 11 16 1818
70 % 11 16 1827
50 % 11 16 1863
40 % 11 16 1866
30 % 11 16 1804

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures