Sequence Similarity Clusters for the Entities in PDB 1D6M

Entity #1 | Chains: A
DNA TOPOISOMERASE III protein, length: 653 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 5325
95 % 7 7 5632 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 7 7 5660
70 % 7 7 5536
50 % 7 7 5256
40 % 7 7 4923
30 % 7 7 4400

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1I7D 2 A DNA TOPOISOMERASE III 562 5.99.1.2 | Details
2 2O5C 2 A, B DNA topoisomerase 3 562 5.99.1.2 | Details
3 2O19 2 A, B DNA topoisomerase 3 E. coli topoisomerse III 562 5.99.1.2 | Details
4 2O5E 2 A, B DNA topoisomerase 3 562 5.99.1.2 | Details
5 2O59 2 A, B DNA topoisomerase 3 562 5.99.1.2 | Details
6 2O54 2 A, B DNA topoisomerase 3 562 5.99.1.2 | Details
7 1D6M 1 A DNA TOPOISOMERASE III 562 5.99.1.2 | Details