Sequence Similarity Clusters for the Entities in PDB 1D6K

Entity #1 | Chains: B
5S RRNA E-LOOP (5SE) rna, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
RIBOSOMAL PROTEIN L25 protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 149 150 117
95 % 149 150 162
90 % 149 150 172
70 % 149 150 194
50 % 150 151 226
40 % 150 151 244
30 % 150 151 254

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures