Sequence Similarity Clusters for the Entities in PDB 1D6K

Entity #1 | Chains: B
5S RRNA E-LOOP (5SE) rna, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
RIBOSOMAL PROTEIN L25 protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 142 143 113
95 % 142 143 155
90 % 142 143 165
70 % 142 143 186
50 % 143 144 221
40 % 143 144 245
30 % 143 144 252

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.