Sequence Similarity Clusters for the Entities in PDB 1D6K

Entity #1 | Chains: B
5S RRNA E-LOOP (5SE) rna, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
RIBOSOMAL PROTEIN L25 protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 148 149 116
95 % 148 149 159
90 % 148 149 169
70 % 148 149 193
50 % 149 150 226
40 % 149 150 244
30 % 149 150 254

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures