Sequence Similarity Clusters for the Entities in PDB 1D6E

Entity #1 | Chains: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 69 223
95 % 33 76 297
90 % 36 92 228
70 % 36 92 262
50 % 48 142 175
40 % 48 142 189
30 % 95 296 95
Entity #2 | Chains: B
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 5247
95 % 12 18 2920
90 % 32 73 324
70 % 46 133 163
50 % 48 142 174
40 % 48 142 188
30 % 96 296 95
Entity #3 | Chains: C
ENTEROTOXIN TYPE B protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 16 1391
95 % 9 18 1582
90 % 9 18 1617
70 % 9 18 1650
50 % 32 56 456
40 % 34 59 441
30 % 51 88 295
Entity #4 | Chains: D
PEPTIDOMIMETIC INHIBITOR protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.