Sequence Similarity Clusters for the Entities in PDB 1D6E

Entity #1 | Chains: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 69 234
95 % 33 76 309
90 % 36 92 238
70 % 36 92 271
50 % 48 142 181
40 % 48 142 194
30 % 95 296 100
Entity #2 | Chains: B
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 5369
95 % 12 18 2967
90 % 32 73 335
70 % 46 133 168
50 % 48 142 180
40 % 48 142 193
30 % 96 296 100
Entity #3 | Chains: C
ENTEROTOXIN TYPE B protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 16 1440
95 % 9 18 1625
90 % 9 18 1655
70 % 9 18 1692
50 % 32 56 468
40 % 34 59 458
30 % 51 88 305
Entity #4 | Chains: D
PEPTIDOMIMETIC INHIBITOR protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.